Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
Prostate cancer
NA
NA

Attributes by original data submitter

Sample

source_name
Prostate cancer patient a
tissue
non-malignant adjacent tissues
chip antibody
anti-AR (N20) from Santa Cruz Biotechnology (Santa Cruz, CA)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
138753453
Reads aligned (%)
75.7
Duplicates removed (%)
53.8
Number of peaks
1947 (qval < 1E-05)

hg19

Number of total reads
138753453
Reads aligned (%)
74.7
Duplicates removed (%)
54.4
Number of peaks
1645 (qval < 1E-05)

Base call quality data from DBCLS SRA