SRX219379
GSM1070131: MM1S WCE DMSO forCdk9i; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
MM.1S
Primary Tissue
Blood
Tissue Diagnosis
Multiple Myeloma

Attributes by original data submitter

Sample

source_name
Multiple myeloma
chip antibody
None
chip antibody catalog number
None WCE
chip antibody manufacturer
None WCE
cell line
MM1.S
duration
6h
drug
DMSO
barcode removed
GTTTCG

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
19556257
Reads aligned (%)
73.7
Duplicates removed (%)
71.1
Number of peaks
1382 (qval < 1E-05)

hg19

Number of total reads
19556257
Reads aligned (%)
73.5
Duplicates removed (%)
71.5
Number of peaks
1583 (qval < 1E-05)

Base call quality data from DBCLS SRA