Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
MM.1S
Primary Tissue
Blood
Tissue Diagnosis
Multiple Myeloma

Attributes by original data submitter

Sample

source_name
Multiple myeloma
chip antibody
RNA Pol II (Rpb1 N-terminus)
chip antibody catalog number
SC-899
chip antibody manufacturer
Santa Cruz
cell line
MM1.S
duration
6h
drug
DMSO
barcode removed
CCGTCC

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
25224648
Reads aligned (%)
95.5
Duplicates removed (%)
33.7
Number of peaks
16084 (qval < 1E-05)

hg19

Number of total reads
25224648
Reads aligned (%)
94.8
Duplicates removed (%)
34.5
Number of peaks
16135 (qval < 1E-05)

Base call quality data from DBCLS SRA