SRX218536
GSM1067409: Rabbit IgG mouse liver ChIP-seq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

GEO Accession
GSM1067409
strain
C57BL/6
age/gender
2-3 month old males
chip antibody
Santa Cruz Tech. rIgG (sc-2027)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
100283507
Reads aligned (%)
96.0
Duplicates removed (%)
16.6
Number of peaks
1059 (qval < 1E-05)

mm9

Number of total reads
100283507
Reads aligned (%)
95.7
Duplicates removed (%)
16.5
Number of peaks
1223 (qval < 1E-05)

Base call quality data from DBCLS SRA