Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
mouse embryonic stem cells
cell line
Ctnnb1-Biotin-3xFLAG knock-in V6.5 ESC line
chip-antibody
none
treatment
CHIR99021 (3uM)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
42995860
Reads aligned (%)
97.1
Duplicates removed (%)
45.1
Number of peaks
792 (qval < 1E-05)

mm9

Number of total reads
42995860
Reads aligned (%)
96.9
Duplicates removed (%)
45.2
Number of peaks
921 (qval < 1E-05)

Base call quality data from DBCLS SRA