SRX218227
GSM1065721: HSF1 heat-treated mitotic K562; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HSF1

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

source_name
K562 cells
cell line
K562 cells
cell cycle phase
arrested to mitosis
treatment
30 min at 42C
chip antibody
HSF1 (SPA-901, Enzo, Lot#09011025)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
11682610
Reads aligned (%)
89.6
Duplicates removed (%)
27.5
Number of peaks
153 (qval < 1E-05)

hg19

Number of total reads
11682610
Reads aligned (%)
88.8
Duplicates removed (%)
28.9
Number of peaks
551 (qval < 1E-05)

Base call quality data from DBCLS SRA