Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

strain
C3H
age
Immortal cell line
sex
not applicable
tissue
not applicable
cell_line
C2C12
cell_description
Myoblast cell line derived from thigh muscle of C3H mice after crush injury
Replicate
2
growth_protocol
Differentiation culture
Sample_run
ChIP - Input
chip antibody
none

Sequenced DNA Library

library_name
MT_input_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1000

mm10

Number of total reads
21619752
Reads aligned (%)
85.1
Duplicates removed (%)
67.8
Number of peaks
2919 (qval < 1E-05)

mm9

Number of total reads
21619752
Reads aligned (%)
85.0
Duplicates removed (%)
67.8
Number of peaks
2890 (qval < 1E-05)

Base call quality data from DBCLS SRA