Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BrdU

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Splenic B Cells
ChIP
Brdu
cell type
In vitro activated B Cells
strain
129/Sv x C57BL/6
genotype
wildtype
growth duration
28 hr
chip antibody
GE Healthcare, RPN-202 and BD Biosciences, 347580
treatment protocol
10 mM hydroxyurea for 6 hrs

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
35626151
Reads aligned (%)
95.5
Duplicates removed (%)
45.0
Number of peaks
316 (qval < 1E-05)

mm9

Number of total reads
35626151
Reads aligned (%)
95.4
Duplicates removed (%)
45.0
Number of peaks
325 (qval < 1E-05)

Base call quality data from DBCLS SRA