Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rpa2

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Splenic B Cells
ChIP
RPA
cell type
In vitro activated B Cells
strain
129/Sv x C57BL/6
genotype
wildtype
growth duration
28 hr
chip antibody
Calbiochem, RPA34-20
treatment protocol
10 mM hydroxyurea for 6 hrs

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
16508219
Reads aligned (%)
85.8
Duplicates removed (%)
11.1
Number of peaks
322 (qval < 1E-05)

mm9

Number of total reads
16508219
Reads aligned (%)
85.7
Duplicates removed (%)
11.3
Number of peaks
356 (qval < 1E-05)

Base call quality data from DBCLS SRA