SRX216757
daf-2 SWSN-1::GFP ChIP-Seq IP

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

strain
GR1900
label
daf-2_SWSN-1::GFP_IP

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina MiSeq

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
5898500
Reads aligned (%)
86.2
Duplicates removed (%)
19.5
Number of peaks
4178 (qval < 1E-05)

ce10

Number of total reads
5898500
Reads aligned (%)
86.2
Duplicates removed (%)
19.5
Number of peaks
4177 (qval < 1E-05)

Base call quality data from DBCLS SRA