Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
bcd

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

source_name
uniform Bcd (high) Chromatin Immunoprecipitation
timepoint
NC14
tissue
embryo
number of embryos
200

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

dm3

Number of total reads
29119621
Reads aligned (%)
49.3
Duplicates removed (%)
38.9
Number of peaks
5011 (qval < 1E-05)

dm6

Number of total reads
29119621
Reads aligned (%)
46.3
Duplicates removed (%)
42.3
Number of peaks
5039 (qval < 1E-05)

Base call quality data from DBCLS SRA