Antigen

Antigen Class

TFs and others

Antigen

FOXA1

Cell type

Cell type Class

Others

Cell type

RT4

Primary Tissue

Urinary Bladder

Tissue Diagnosis

Carcinoma Transitional Cell

Sample

source_name

RT4 cells

cell type

RT4

tissue type

transitional cell papilloma

Stage

adult

chip antibody

FoxA1 (ab5089)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

not applicable Sequencing libraries were generated using Rubicon ThruPLEX DNA-seq kit.

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

12551068

Reads aligned (%)

68.2

Duplicates removed (%)

36.9

Number of peaks

24168 (qval < 1E-05)

hg19

Number of total reads

12551068

Reads aligned (%)

67.8

Duplicates removed (%)

37.9

Number of peaks

23990 (qval < 1E-05)