Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Uterus
Cell type
Endometriosis
MeSH Description
An enlarged area of ENDOMETRIOSIS that resembles a tumor. It is usually found in the OVARY. When it is filled with old blood, it is known as a chocolate cyst.

Attributes by original data submitter

Sample

source_name
Endometriosis
cell type
hTERT immortalized endometriosis cells
genotype/variation
Control
antibody
H3K4me1

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
51311829
Reads aligned (%)
93.8
Duplicates removed (%)
20.1
Number of peaks
57021 (qval < 1E-05)

hg19

Number of total reads
51311829
Reads aligned (%)
93.4
Duplicates removed (%)
20.7
Number of peaks
56786 (qval < 1E-05)

Base call quality data from DBCLS SRA