Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
SU-DHL-6
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma

Attributes by original data submitter

Sample

age
43 year
dev stage
adult
donor ID
ENCDO353AAA
sex
male
health state
large cell lymphoma; diffuse mixed histiocytic and lymphocytic lymphoma; follicular B cell lymphoma
sample type
immortalized cell line
cell line
SUDHL6
lab
Bradley Bernstein, Broad

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
34183327
Reads aligned (%)
96.0
Duplicates removed (%)
2.8
Number of peaks
499 (qval < 1E-05)

hg19

Number of total reads
34183327
Reads aligned (%)
95.3
Duplicates removed (%)
3.8
Number of peaks
770 (qval < 1E-05)

Base call quality data from DBCLS SRA