Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me3

Cell type

Cell type Class
Adult
Cell type
Young adult
NA
NA

Attributes by original data submitter

Sample

source_name
Young adult whole animal
genotype/variation
met-2(n4256);set-25(ok5021);set-32(ok1457)
temperature
19˚C
feeding
GFP RNAi
chip antibody
Anti-Histone H3 (tri methyl K9)
molecule subtype
DNA extracted from immunoprecipitated chromatin

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

ce11

Number of total reads
8786701
Reads aligned (%)
92.1
Duplicates removed (%)
7.0
Number of peaks
643 (qval < 1E-05)

ce10

Number of total reads
8786701
Reads aligned (%)
92.1
Duplicates removed (%)
7.0
Number of peaks
644 (qval < 1E-05)

Base call quality data from DBCLS SRA