Antigen

Antigen Class

TFs and others

Antigen

Pou5f1

Cell type

Cell type Class

Pluripotent stem cell

Cell type

F9

Tissue

Testis

Disease

Embryonal Carcinoma; Testicular Teratoma

Sample

source_name

F9+RA cells

cell type

Embryonic carcinoma cell line

developmental stage

Differentiated into primitive endoderm-like cells

treatment

Treated with retinoic acid

cell line

F9

chip antibody 1

Pou5f1/Oct4

chip antibody manufacturer 1

Santa Cruz

chip antibody 2

none

chip antibody manufacturer 2

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

29878370

Reads aligned (%)

97.5

Duplicates removed (%)

9.2

Number of peaks

27055 (qval < 1E-05)

mm9

Number of total reads

29878370

Reads aligned (%)

97.4

Duplicates removed (%)

9.3

Number of peaks

27080 (qval < 1E-05)