SRX213795
GSM1058998: mESC Input solexa; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse ES cells
strain
129S4/SvJae
phenotype
agouti
gender
male
cell type
ESC
genotype/variation
wild type
chip antibody
None

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
67192990
Reads aligned (%)
86.0
Duplicates removed (%)
13.3
Number of peaks
948 (qval < 1E-05)

mm9

Number of total reads
67192990
Reads aligned (%)
85.9
Duplicates removed (%)
13.3
Number of peaks
1031 (qval < 1E-05)

Base call quality data from DBCLS SRA