SRX213540
GSM1058957: Mef2Da1-BLOCK; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
C2C12
cell line
C2C12
chip antibody
Mef2Da1 antibody control (antibody blocked with peptide)
chip antibody manufacturer
Genscript
peptide
keyhole limpet hemocyanin coupled peptides - CELDGLFRRYGST

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
189933020
Reads aligned (%)
84.9
Duplicates removed (%)
59.3
Number of peaks
2492 (qval < 1E-05)

mm9

Number of total reads
189933020
Reads aligned (%)
84.7
Duplicates removed (%)
59.3
Number of peaks
2804 (qval < 1E-05)

Base call quality data from DBCLS SRA