SRX213402
GSM1058725: ML Input DNA ChIPSeq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Breast
Cell type
Mammary glands
NA
NA

Attributes by original data submitter

Sample

source_name
mammary gland
cell type
Mature luminal cells
state
virgin
chip antibody
none
strain
FVB/N

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
18176073
Reads aligned (%)
98.0
Duplicates removed (%)
10.7
Number of peaks
360 (qval < 1E-05)

mm9

Number of total reads
18176073
Reads aligned (%)
97.9
Duplicates removed (%)
11.3
Number of peaks
357 (qval < 1E-05)

Base call quality data from DBCLS SRA