Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Monocytes-CD14+

Tissue

monocytes

Lineage

mesoderm

Description

Monocytes-CD14+ are CD14-positive cells from human leukapheresis production, from donor RO 01746 (draw 1 ID is RO 01746, draw 2 ID is RO 01826), newly promoted to tier 2: not in 2011 analysis

Sample

source_name

Peripheral blood cells

cell type

CD14+ monocytes

chip antibody

none, input

experimental condition

Combination of the 4 conditions

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

246002355

Reads aligned (%)

96.0

Duplicates removed (%)

13.8

Number of peaks

3566 (qval < 1E-05)

hg19

Number of total reads

246002355

Reads aligned (%)

95.3

Duplicates removed (%)

14.9

Number of peaks

3123 (qval < 1E-05)