Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
STAT1

Cell type

Cell type Class
Blood
Cell type
Monocytes-CD14+
Tissue
monocytes
Lineage
mesoderm
Description
Monocytes-CD14+ are CD14-positive cells from human leukapheresis production, from donor RO 01746 (draw 1 ID is RO 01746, draw 2 ID is RO 01826), newly promoted to tier 2: not in 2011 analysis

Attributes by original data submitter

Sample

source_name
Peripheral blood cells
cell type
CD14+ monocytes
chip antibody
STAT1 (Santa Cruz sc-345)
experimental condition
Cultured with MCSF (10ng/ml) and stimulated with LPS (50ng/ml) for 3 hours.

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
252378722
Reads aligned (%)
73.2
Duplicates removed (%)
19.1
Number of peaks
39600 (qval < 1E-05)

hg38

Number of total reads
252378722
Reads aligned (%)
75.0
Duplicates removed (%)
17.9
Number of peaks
40365 (qval < 1E-05)

Base call quality data from DBCLS SRA