SRX212645
GSM1057374: RPMI-8402 ZFX ChIPSeq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ZFX

Cell type

Cell type Class
Blood
Cell type
RPMI 8402
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
RPMI-8402_ZFX_ChIPSeq
cell line
RPMI-8402
cell type
T-lymphoblastic leukemia (T-ALL)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
23326406
Reads aligned (%)
95.0
Duplicates removed (%)
6.6
Number of peaks
916 (qval < 1E-05)

hg38

Number of total reads
23326406
Reads aligned (%)
96.0
Duplicates removed (%)
5.3
Number of peaks
970 (qval < 1E-05)

Base call quality data from DBCLS SRA