SRX212644
GSM1057373: NOMO-1 Input; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
NOMO-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
NOMO-1_Input
cell line
NOMO-1
cell type
Acute myeloid leukemia (AML)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
60807108
Reads aligned (%)
98.6
Duplicates removed (%)
2.1
Number of peaks
1585 (qval < 1E-05)

hg19

Number of total reads
60807108
Reads aligned (%)
97.7
Duplicates removed (%)
3.4
Number of peaks
1131 (qval < 1E-05)

Base call quality data from DBCLS SRA