Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ZFX

Cell type

Cell type Class
Blood
Cell type
NOMO-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
NOMO-1_ZFX_ChIPSeq
cell line
NOMO-1
cell type
Acute myeloid leukemia (AML)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
21557323
Reads aligned (%)
91.7
Duplicates removed (%)
4.8
Number of peaks
1936 (qval < 1E-05)

hg38

Number of total reads
21557323
Reads aligned (%)
93.8
Duplicates removed (%)
3.5
Number of peaks
1990 (qval < 1E-05)

Base call quality data from DBCLS SRA