SRX212447
GSM1056938: FOXP3 Tconv S30b; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
FOXP3

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+CD25- expanded conventional T cells
donor
S30b
cell type
CD4+CD25- expanded conventional T cells
chip antibody
FOXP3 (Novus NB600-245)
chip antibody manufacturer
Novus

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiScanSQ

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
45814311
Reads aligned (%)
20.6
Duplicates removed (%)
69.2
Number of peaks
928 (qval < 1E-05)

hg38

Number of total reads
45814311
Reads aligned (%)
22.0
Duplicates removed (%)
67.5
Number of peaks
902 (qval < 1E-05)

Base call quality data from DBCLS SRA