SRX212428
GSM1056919: H3K27ac TregRA+ S030b; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Blood
Cell type
Treg
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+CD25+CD45RA+ expanded naive regulatory T cells
donor
S030b
cell type
CD4+CD25+CD45RA+ expanded naive regulatory T cells
chip antibody
H3K27ac (abcam ab 4729)
chip antibody manufacturer
abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiScanSQ

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
32078385
Reads aligned (%)
94.5
Duplicates removed (%)
18.1
Number of peaks
39334 (qval < 1E-05)

hg19

Number of total reads
32078385
Reads aligned (%)
94.2
Duplicates removed (%)
18.3
Number of peaks
39283 (qval < 1E-05)

Base call quality data from DBCLS SRA