SRX212376
GSM1056848: negative control; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Prostate
Cell type
EP156T
NA
NA

Attributes by original data submitter

Sample

source_name
EPT1 cells
cell line
EPT1 cells
cell type
prostate cell model
chip antibody
IgG antibody

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
29327919
Reads aligned (%)
71.5
Duplicates removed (%)
7.1
Number of peaks
1129 (qval < 1E-05)

hg19

Number of total reads
29327919
Reads aligned (%)
70.5
Duplicates removed (%)
9.1
Number of peaks
1275 (qval < 1E-05)

Base call quality data from DBCLS SRA