SRX212236
GSM1056293: IgG; Caenorhabditis elegans; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Embryos
NA
NA

Attributes by original data submitter

Sample

source_name
Wild-type embryos
developmental stage
Embryo
genotype
wild type
genetic background
N2
chip antibody
Rabbit IgG from Santa Cruz Biotechnology (sc-2027, Lot # A2609)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
12727065
Reads aligned (%)
93.8
Duplicates removed (%)
20.7
Number of peaks
997 (qval < 1E-05)

ce10

Number of total reads
12727065
Reads aligned (%)
93.8
Duplicates removed (%)
20.7
Number of peaks
997 (qval < 1E-05)

Base call quality data from DBCLS SRA