Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Lung
Cell type
Lung fibroblasts
NA
NA

Attributes by original data submitter

Sample

source_name
fetal lung fibroblast
treatment
TNF-α (10ng/mL) 1hr
experiment
ChIP-seq
antibody
H3K4me1 (Abcam ab8895)
restriction enzyme
no

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
22360718
Reads aligned (%)
46.5
Duplicates removed (%)
8.1
Number of peaks
3372 (qval < 1E-05)

hg19

Number of total reads
22360718
Reads aligned (%)
46.2
Duplicates removed (%)
8.1
Number of peaks
3351 (qval < 1E-05)

Base call quality data from DBCLS SRA