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For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: EP300
wikigenes
PDBj
CellType: Lung fibroblasts
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX212185
GSM1055813: ChIP-Seq p300 IMR90+TNF-α; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
EP300
Cell type
Cell type Class
Lung
Cell type
Lung fibroblasts
NA
NA
Attributes by original data submitter
Sample
source_name
fetal lung fibroblast
treatment
TNF-α (10ng/mL) 1hr
experiment
ChIP-seq
antibody
p300 (Santa Cruz sc-585)
restriction enzyme
no
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
hg19
Number of total reads
52935420
Reads aligned (%)
60.6
Duplicates removed (%)
35.3
Number of peaks
18063 (qval < 1E-05)
hg38
Number of total reads
52935420
Reads aligned (%)
61.5
Duplicates removed (%)
34.6
Number of peaks
18151 (qval < 1E-05)
Base call quality data from
DBCLS SRA