Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
RELA

Cell type

Cell type Class
Lung
Cell type
Lung fibroblasts
NA
NA

Attributes by original data submitter

Sample

source_name
fetal lung fibroblast
treatment
TNF-α (10ng/mL) 1hr
experiment
ChIP-seq
antibody
NF-κB p65 (Santa Cruz sc-372)
restriction enzyme
no

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
22125142
Reads aligned (%)
46.1
Duplicates removed (%)
14.8
Number of peaks
22378 (qval < 1E-05)

hg38

Number of total reads
22125142
Reads aligned (%)
47.0
Duplicates removed (%)
14.5
Number of peaks
22598 (qval < 1E-05)

Base call quality data from DBCLS SRA