Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Pluripotent stem cell

Cell type

Embryoid Bodies

MeSH Description

Spontaneous aggregations of human embryonic stem cells that occur in vitro after culturing in a medium that lacks LEUKEMIC INHIBITORY FACTOR. The embryoid bodies can further differentiate into cells that represent different lineages.

Sample

GEO Accession

GSM1055554

cell-type

Flk1+ BL-CFCs isolated from day 4 embryoid bodies

chip antibody

none

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

79389236

Reads aligned (%)

95.3

Duplicates removed (%)

30.6

Number of peaks

1105 (qval < 1E-05)

mm9

Number of total reads

79389236

Reads aligned (%)

95.1

Duplicates removed (%)

30.6

Number of peaks

1243 (qval < 1E-05)