Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Hematopoietic Stem Cells
MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by original data submitter

Sample

source_name
Hematopoietic Stem Cells
cell type
Hematopoietic Stem Cells
compartment
LSK (Lin- Sca-1+ Kit+)
antibody
IgG, Sigma, I8140
strain
C57BL/6 cebpa flox/flox; Mx1Cre

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
80676851
Reads aligned (%)
38.9
Duplicates removed (%)
20.5
Number of peaks
1098 (qval < 1E-05)

mm9

Number of total reads
80676851
Reads aligned (%)
38.8
Duplicates removed (%)
20.6
Number of peaks
1099 (qval < 1E-05)

Base call quality data from DBCLS SRA