SRX209932
GSM1053515: Abrupt scrib; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ab

Cell type

Cell type Class
Larvae
Cell type
Eye-antennal discs
NA
NA

Attributes by original data submitter

Sample

source_name
Eye/antennal imaginal discs, scrib mutant [ChIP]
tissue
Eye/antennal imaginal discs
antibody
anti-Abrupt (a polyclonal rabbit antibody from Steven Crews)
strain
FRT82B,scrib1 (Bilder and Perrimon 2000)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
11779768
Reads aligned (%)
91.6
Duplicates removed (%)
19.4
Number of peaks
3207 (qval < 1E-05)

dm3

Number of total reads
11779768
Reads aligned (%)
91.9
Duplicates removed (%)
17.3
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA