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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: EP300
wikigenes
PDBj
CellType: Fetal brain
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX209673
GSM1052710: human fetal cortex p300; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
EP300
Cell type
Cell type Class
Neural
Cell type
Fetal brain
NA
NA
Attributes by original data submitter
Sample
source_name
human fetal (gestational week 20) cortex
tissue
human cortex
developmental stage
fetal (gestational week 20)
chip antibody
2)
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
70314148
Reads aligned (%)
78.8
Duplicates removed (%)
4.9
Number of peaks
12864 (qval < 1E-05)
hg19
Number of total reads
70314148
Reads aligned (%)
78.4
Duplicates removed (%)
5.2
Number of peaks
12537 (qval < 1E-05)
Base call quality data from
DBCLS SRA