Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EP300

Cell type

Cell type Class
Neural
Cell type
Fetal brain
NA
NA

Attributes by original data submitter

Sample

source_name
human fetal (gestational week 20) cortex
tissue
human cortex
developmental stage
fetal (gestational week 20)
chip antibody
2)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
70314148
Reads aligned (%)
74.3
Duplicates removed (%)
5.2
Number of peaks
12537 (qval < 1E-05)

hg38

Number of total reads
70314148
Reads aligned (%)
74.9
Duplicates removed (%)
4.9
Number of peaks
12864 (qval < 1E-05)

Base call quality data from DBCLS SRA