Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
tbp-1

Cell type

Cell type Class
Embryo
Cell type
Mixed embryo
NA
NA

Attributes by original data submitter

Sample

source_name
Mixed-stage embryos
strain
N2
treatment
no treatment
chip antibody
SDQ0839_TBP1 [Novus Biologicals, catalog# 29610002, lot# G3048-022, Animal SDQ0839]

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

ce10

Number of total reads
15778723
Reads aligned (%)
37.4
Duplicates removed (%)
54.6
Number of peaks
1321 (qval < 1E-05)

ce11

Number of total reads
15778723
Reads aligned (%)
37.4
Duplicates removed (%)
54.6
Number of peaks
1349 (qval < 1E-05)

Base call quality data from DBCLS SRA