Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
rpc-1

Cell type

Cell type Class
Embryo
Cell type
Mixed embryo
NA
NA

Attributes by original data submitter

Sample

source_name
Mixed-stage embryos
strain
N2
treatment
NPP-13 RNAi
chip antibody
SDQ4663_RPC1 [Novus Biologicals, catalog# 53330002, lot# G3048-240A02, Animal SDQ4663]

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

ce11

Number of total reads
19098144
Reads aligned (%)
88.3
Duplicates removed (%)
77.0
Number of peaks
2363 (qval < 1E-05)

ce10

Number of total reads
19098144
Reads aligned (%)
88.3
Duplicates removed (%)
77.0
Number of peaks
2265 (qval < 1E-05)

Base call quality data from DBCLS SRA