Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Jurkat
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
Jurkat_input
cell line
Jurkat Trex (Invitrogen)
chip antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
70873611
Reads aligned (%)
94.7
Duplicates removed (%)
12.1
Number of peaks
1361 (qval < 1E-05)

hg19

Number of total reads
70873611
Reads aligned (%)
93.9
Duplicates removed (%)
13.4
Number of peaks
1279 (qval < 1E-05)

Base call quality data from DBCLS SRA