SRX206366
GSM1038260: ChIP-Seq WCE 0HR; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
ZHBTc4 ES cells
strain
C57BL/6-129
chip antibody
None
cell type
Embryonic stem cells

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
27357459
Reads aligned (%)
94.7
Duplicates removed (%)
61.8
Number of peaks
586 (qval < 1E-05)

mm9

Number of total reads
27357459
Reads aligned (%)
94.5
Duplicates removed (%)
62.0
Number of peaks
613 (qval < 1E-05)

Base call quality data from DBCLS SRA