Antigen

Antigen Class

TFs and others

Antigen

Rpa1

Cell type

Cell type Class

Blood

Cell type

Thymocytes

MeSH Description

HEMATOPOIETIC PROGENITOR CELLS that have migrated to the THYMUS where they differentiate into T-LYMPHOCYTES. Thymocytes are classified into maturational stages based on the expression of CELL SURFACE ANTIGENS.

Sample

source_name

thymocyte

chip antibody manufacturer

Calbiochem

cell type

thymocyte

strain

C57BL/6

genotype

WT

chip antibody

RPA

Sequenced DNA Library

library_name

GSM1040437: thymocyte_WT_RPAip_b

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

25354771

Reads aligned (%)

70.0

Duplicates removed (%)

14.0

Number of peaks

554 (qval < 1E-05)

mm9

Number of total reads

25354771

Reads aligned (%)

69.9

Duplicates removed (%)

14.0

Number of peaks

582 (qval < 1E-05)