Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rpa1

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
in vitro activated B cells
cell type
in vitro activated B cells
strain
C57BL/6
genotype
53BP1ko
chip antibody
RPA
cell cycle
SG2M

Sequenced DNA Library

library_name
GSM1040412: activatedB_53BP1ko_SG2M_RPA_c
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
40416062
Reads aligned (%)
61.2
Duplicates removed (%)
32.6
Number of peaks
4716 (qval < 1E-05)

mm9

Number of total reads
40416062
Reads aligned (%)
61.1
Duplicates removed (%)
32.5
Number of peaks
4725 (qval < 1E-05)

Base call quality data from DBCLS SRA