Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rpa1

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
in vitro activated B cells
cell type
in vitro activated B cells
strain
C57BL/6
genotype
53BP1ko
chip antibody
RPA
cell cycle
G1

Sequenced DNA Library

library_name
GSM1040402: activatedB_53BP1ko_G1_RPA_c
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
27009593
Reads aligned (%)
58.3
Duplicates removed (%)
59.0
Number of peaks
4309 (qval < 1E-05)

mm9

Number of total reads
27009593
Reads aligned (%)
58.2
Duplicates removed (%)
59.0
Number of peaks
4262 (qval < 1E-05)

Base call quality data from DBCLS SRA