Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Embryo
Cell type
Hindlimb
MeSH Description
Either of two extremities of four-footed non-primate land animals. It usually consists of a FEMUR; TIBIA; and FIBULA; tarsals; METATARSALS; and TOES. (From Storer et al., General Zoology, 6th ed, p73)

Attributes by original data submitter

Sample

source_name
mouse_E13.5_HL
developmental stage
gestational day E13.5
tissue
hindlimb autopod
chip antibody
H3K27ac
chip antibody vendor
Abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
40413734
Reads aligned (%)
99.3
Duplicates removed (%)
10.5
Number of peaks
11096 (qval < 1E-05)

mm9

Number of total reads
40413734
Reads aligned (%)
99.1
Duplicates removed (%)
10.6
Number of peaks
11123 (qval < 1E-05)

Base call quality data from DBCLS SRA