Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Embryo
Cell type
Hindlimb
MeSH Description
Either of two extremities of four-footed non-primate land animals. It usually consists of a FEMUR; TIBIA; and FIBULA; tarsals; METATARSALS; and TOES. (From Storer et al., General Zoology, 6th ed, p73)

Attributes by original data submitter

Sample

source_name
mouse_E11.5_HL
developmental stage
gestational day E11.5
tissue
hindlimb autopod
chip antibody
H3K27ac
chip antibody vendor
Abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
46164509
Reads aligned (%)
98.0
Duplicates removed (%)
13.0
Number of peaks
6187 (qval < 1E-05)

mm9

Number of total reads
46164509
Reads aligned (%)
97.8
Duplicates removed (%)
13.0
Number of peaks
6351 (qval < 1E-05)

Base call quality data from DBCLS SRA