SRX205521
GSM1039538: mouse E12.5 FL rep1 input; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Embryo
Cell type
Forelimb
MeSH Description
A front limb of a quadruped. (The Random House College Dictionary, 1980)

Attributes by original data submitter

Sample

source_name
mouse_E12.5_FL
strain
C57BL/6J
developmental stage
gestational day E12.5
tissue
forelimb autopod

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
36898693
Reads aligned (%)
79.8
Duplicates removed (%)
10.7
Number of peaks
616 (qval < 1E-05)

mm9

Number of total reads
36898693
Reads aligned (%)
79.6
Duplicates removed (%)
10.7
Number of peaks
598 (qval < 1E-05)

Base call quality data from DBCLS SRA