Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MED1

Cell type

Cell type Class
Blood
Cell type
MM.1S
Primary Tissue
Blood
Tissue Diagnosis
Multiple Myeloma

Attributes by original data submitter

Sample

source_name
Multiple myeloma
chip antibody
Med1/TRAP220
chip antibody details
Bethyl A300-793A
cell type
MM1.S
duration
6h
treatment
DMSO
concentration
0.05%

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
37714556
Reads aligned (%)
45.1
Duplicates removed (%)
27.0
Number of peaks
29993 (qval < 1E-05)

hg38

Number of total reads
37714556
Reads aligned (%)
45.5
Duplicates removed (%)
26.7
Number of peaks
30062 (qval < 1E-05)

Base call quality data from DBCLS SRA