SRX204418
GSM1036411: WCE P493-6 T=0HR; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
P493-6
NA
NA

Attributes by original data submitter

Sample

source_name
B-cell lymphoma
chip antibody
None
antibody catalog number
None WCE
cell type
P493-6
c-myc level
low

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
29834608
Reads aligned (%)
45.4
Duplicates removed (%)
28.7
Number of peaks
537 (qval < 1E-05)

hg19

Number of total reads
29834608
Reads aligned (%)
44.8
Duplicates removed (%)
29.3
Number of peaks
718 (qval < 1E-05)

Base call quality data from DBCLS SRA