SRX204411
GSM1036404: c-Myc P493-6 No Tet ChipSeq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MYC

Cell type

Cell type Class
Blood
Cell type
P493-6
NA
NA

Attributes by original data submitter

Sample

source_name
B-cell lymphoma
chip antibody
c-Myc
antibody catalog number
Santa Cruz SC-764
cell type
P493-6
c-myc level
steady state

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
46549903
Reads aligned (%)
77.9
Duplicates removed (%)
15.0
Number of peaks
8865 (qval < 1E-05)

hg38

Number of total reads
46549903
Reads aligned (%)
79.8
Duplicates removed (%)
14.0
Number of peaks
8782 (qval < 1E-05)

Base call quality data from DBCLS SRA