SRX204383
GSM1036274: input; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Megakaryocytes
MeSH Description
Very large BONE MARROW CELLS which release mature BLOOD PLATELETS.

Attributes by original data submitter

Sample

source_name
primary megakaryocytes
chip antibody
none
cell type
primary megakaryocytes
genetic background
C57BL6

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
36144370
Reads aligned (%)
78.6
Duplicates removed (%)
44.7
Number of peaks
24507 (qval < 1E-05)

mm9

Number of total reads
36144370
Reads aligned (%)
78.1
Duplicates removed (%)
44.6
Number of peaks
24209 (qval < 1E-05)

Base call quality data from DBCLS SRA