SRX204179
GSM1035441: prolif PIASy ChIPSeq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PIAS4

Cell type

Cell type Class
Lung
Cell type
WI-38
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
prolif_PIASy_ChIPSeq
cell line
WI38
cell type
primary fibroblasts
status
Proliferative
genotype/variation
infected with pBABE-puro-empty
chip antibodies
PIASy (non-commercial)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
33938262
Reads aligned (%)
70.8
Duplicates removed (%)
22.9
Number of peaks
2708 (qval < 1E-05)

hg19

Number of total reads
33938262
Reads aligned (%)
70.3
Duplicates removed (%)
24.1
Number of peaks
2758 (qval < 1E-05)

Base call quality data from DBCLS SRA